Update raw output files and manifests

internal/framework/pipeline/runner.go

@@ -157,6 +157,7 @@ func (r *Runner) Run(ctx context.Context, input RunInput) (output RunOutput, err
 	} else {
 		output.Manifest.ValidationStatus = "approved"
 	}
+	populateRawOutputManifest(&output)
 	output.Manifest.CompletedAt = timePtr(time.Now().UTC())
 
 	encoder, err := r.registries.Outputs.Build(input.Pipeline.Output.Module)
@@ -636,12 +637,64 @@ func manifestFromPipeline(input RunInput) artifacts.RunManifest {
 
 func failOutput(output RunOutput) RunOutput {
 	if output.Manifest.PipelineID != "" {
+		populateRawOutputManifest(&output)
 		output.Manifest.ValidationStatus = "failed"
 		output.Manifest.CompletedAt = timePtr(time.Now().UTC())
 	}
 	return output
 }
 
+func populateRawOutputManifest(output *RunOutput) {
+	if output == nil {
+		return
+	}
+	output.Manifest.NormalizedOutputs = normalizedOutputManifests(output.NormalizeOutputs)
+	output.Manifest.RejectedOutputs = rejectedOutputManifests(output.Rejected)
+}
+
+func normalizedOutputManifests(outputs []contracts.NormalizeOutput) []artifacts.NormalizedOutputManifest {
+	if len(outputs) == 0 {
+		return nil
+	}
+	manifests := make([]artifacts.NormalizedOutputManifest, 0, len(outputs))
+	for _, output := range outputs {
+		manifests = append(manifests, artifacts.NormalizedOutputManifest{
+			LaneID:    output.LaneID,
+			ModuleKey: output.NormalizerKey,
+			SourceID:  output.SourceID,
+			MediaType: output.Payload.MediaType,
+			Schema: artifacts.OutputSchemaProvenance{
+				ID:      output.Schema.ID,
+				Name:    output.Schema.Name,
+				Version: output.Schema.Version,
+			},
+		})
+	}
+	return manifests
+}
+
+func rejectedOutputManifests(rejected []contracts.RejectedOutput) []artifacts.RejectedOutputManifest {
+	if len(rejected) == 0 {
+		return nil
+	}
+	manifests := make([]artifacts.RejectedOutputManifest, 0, len(rejected))
+	for _, output := range rejected {
+		manifests = append(manifests, artifacts.RejectedOutputManifest{
+			Stage:                  output.Stage,
+			LaneID:                 output.LaneID,
+			ModuleKey:              output.ModuleKey,
+			ChunkID:                output.ChunkID,
+			ChunkIndex:             output.ChunkIndex,
+			ValidatorName:          output.ValidatorName,
+			ReasonCode:             output.ReasonCode,
+			Message:                output.Message,
+			AttemptCount:           output.AttemptCount,
+			DiagnosticArtifactPath: output.DiagnosticArtifactPath,
+		})
+	}
+	return manifests
+}
+
 func setLaneManifestMetadata(output *RunOutput, laneID string, modules ...any) {
 	if output == nil {
 		return