Document prepared Notarius references

docs/troubleshooting.md

@@ -158,6 +158,66 @@ is expected audit state, not a signal to relink the old bundle manually.
 
 Relevant reference: [Operations: Extraction Workflow](./operations.md#extraction-workflow).
 
+## Prepared Notarius reference missing or inconsistent
+
+Symptom:
+
+- extraction or resume validation reports that a configured reference source is
+  unavailable, unsafe, empty, or checksum-inconsistent and recommends
+  `prepare --force`.
+
+Likely causes:
+
+- `prepare` has not run since the campaign/session stable input changed;
+- the configured source file is missing;
+- a prepared `inputs/` file or its manifest record was modified independently;
+- a spell-catalog binding exists without an effective `spell_catalog_file`.
+
+Diagnostics:
+
+```bash
+narratio session status 2026-04-04
+narratio session validate 2026-04-04
+```
+
+Safe fix:
+
+- correct the campaign/session input path, then refresh canonical prepared
+  evidence before extraction:
+
+```bash
+narratio run-stage prepare 2026-04-04 --force
+```
+
+Do not point Notarius directly at the original source path or edit the manifest
+checksum. Relevant references: [Notarius reference configuration](./config.md#notarius-reference-bindings)
+and [Operations: Extraction Workflow](./operations.md#extraction-workflow).
+
+## Notarius reference selector or generated-handoff collision
+
+Symptom:
+
+- Notarius exits nonzero with an undeclared reference-slot, incompatible media,
+  or external/generated reference collision error.
+
+Likely causes:
+
+- a selector does not identify a slot declared by the selected Notarius target;
+- a prepared file does not satisfy that slot's Notarius media contract; or
+- a CLI binding attempts to replace a same-run generated D&D handoff.
+
+Safe fix:
+
+- compare external bindings with the selected Notarius pipeline's canonical
+  consumer documentation;
+- keep only campaign-owned external slots on the CLI; and
+- leave registry, scene, combat, and occurrence handoffs to Notarius pipeline
+  composition.
+
+Narratio validates selector structure and prepared evidence, while Notarius
+owns slot declarations, media compatibility, and generated-handoff conflicts.
+Relevant reference: [Notarius integration](./integrations/notarius.md).
+
 ## Atomic Notarius promotion unsupported
 
 Symptom:
@@ -230,6 +290,8 @@ Likely causes:
 
 - the executable/config path, pipeline ID, timeout, working directory, or
   configured output contracts changed;
+- a configured prepared reference selector, source, path, checksum, or byte
+  size changed;
 - the durable bundle, index, lane set, provenance, regular-file status, or
   checksum no longer validates.
 
@@ -252,8 +314,9 @@ Safe fix:
 narratio run-stage extract 2026-04-04 --force
 ```
 
-Narratio fingerprints its invocation contract, not the contents of transitive
-Notarius inputs. Always force extraction after changing them; downstream
+Narratio fingerprints its invocation contract and prepared Narratio reference
+identities, not the contents of other transitive Notarius inputs. Always force
+extraction after changing those external inputs; downstream
 successful stages are then marked stale normally.
 
 Relevant reference: [Operations: Extraction Workflow](./operations.md#extraction-workflow).