Fix underlay provenance and resource path handling

internal/engine/compose.go

@@ -92,14 +92,35 @@ func composeDocuments(inputs ...*document.Node) (*composedDocument, []Diagnostic
 	for _, input := range inputs {
 		applications = append(applications, historyApplication{layer: LayerBase, value: input})
 	}
+	origins := compositionOrigins(collected.ordered)
+	completeCompositionOrigins(root, Path{}, origins)
 	return &composedDocument{
 		root:         root,
 		claims:       cloneCompositionClaims(collected.ordered),
-		origins:      compositionOrigins(collected.ordered),
+		origins:      origins,
 		applications: applications,
 	}, nil
 }
 
+// Conflict claims treat sequences atomically, but inspection needs origins for
+// every descendant. Preserve composite mapping claims while filling those gaps.
+func completeCompositionOrigins(node *document.Node, path Path, origins map[string]Origin) {
+	pointer := path.String()
+	if _, present := origins[pointer]; !present {
+		origins[pointer] = Origin{Layer: LayerBase, Locations: []Location{publicLocation(node.Location)}}
+	}
+	switch node.Kind {
+	case document.Mapping:
+		for _, entry := range node.Mapping {
+			completeCompositionOrigins(entry.Value, path.Key(entry.Key), origins)
+		}
+	case document.Sequence:
+		for index, child := range node.Sequence {
+			completeCompositionOrigins(child, path.Index(index), origins)
+		}
+	}
+}
+
 func (c *compositionClaims) append(node *document.Node, path Path) {
 	claim := compositionClaim{
 		path:     path.clone(),